Protein ZmOrphan184 | |
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Information | |
Orphans Name: | ZmOrphan184 |
Species: | Maize |
Orphans Family: | Orphans |
Gene Name(Synonym): | |
Uniprot ID: | K7U1I6 |
Subgenome: | 2 |
ZmOrphan184 is a protein in the Orphans family.
Overview of domains present in v5 transcripts | |
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PF06203 | |
Zm00001eb173520_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
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Zm00001d049651 | DAPseq | sequence | fimo | position | |
Zm00001d049651 | DAPseq | sequence | fimo | position | |
Zm00001d049651 | ChIPseq | sequence | fimo | position | |
Zm00001d049651 | PChIPseq | sequence | fimo | position |
MARGQRRRRRRRPEPRARASGKGKKARYLSLSDLMVKAEVGATPPRSGCEEAGVKPEEEDARGDGQQRQVEPFAPHHHHE
ASTLFEALPAPSLSDILGPSPSPSPDGAGSGASGLPGADEEDLPRRALRGRERWVYCSGDSSFSPASTPPATATATTSSP
SPPCSSSAASTGASARSLLLKLDYEEILAAWADRGPLYIGAGSDLQLDAAQVASGRAERVRRYKEKRRRRLFAKRIRYEV
RRANAVKRPRFKGRFIKEEDDEGELRPTQPASFSLLLPSSPASSPCVSLHGKRTR
MARGQRRRRRRRPEPRARASGKGKKARYLSLSDLMVKAEVGATPPRSGCEEAGVKPEEEDARGDGQQRQVEPFAPHHHHE
ASTLFEALPAPSLSDILGPSPSPSPDGAGSGASGLPGADEEDLPRRALRGRERWVYCSGDSSFSPASTPPATATATTSSP
SPPCSSSAASTGASARSLLLKLDYEEILAAWADRGPLYIGAGSDLQLDAAQVASGRAERVRRYKEKRRRRLFAKRIRYEV
RRANAVKRPRFKGRFIKEEDDEGELRPTQPASFSLLLPSSPASSPCVSLHGKRTR
MARGQRRRRRRRPEPRARASGKGKKARYLSLSDLMVKAEVGATPPRSGCEEAGVKPEEEDARGDGQQRQVEPFAPHHHHE
ASTLFEALPAPSLSDILGPSPSPSPDGAGSGASGLPGADEEDLPRRALRGRERWVYCSGDSSFSPASTPPATATATTSSP
SPPCSSSAASTGASARSLLLKLDYEEILAAWADRGPLYIGAGSDLQLDAAQVASGRAERVRRYKEKRRRRLFAKRIRYEV
RRANAVKRPRFKGRFIKEEDDEGELRPTQPASFSLLLPSSPASSPCVSLHGKRTR
MARGQRRRRRRRPEPRARASGKGKKARYLSLSDLMVKAEVGATPPRSGCEEAGVKPEEEDARGDGQQRQVEPFAPHHHHE
ASTLFEALPAPSLSDILGPSPSPSPDGAGSGASGLPGADEEDLPRRALRGRERWVYCSGDSSFSPASTPPATATATTSSP
SPPCSSSAASTGASARSLLLKLDYEEILAAWADRGPLYIGAGSDLQLDAAQVASGRAERVRRYKEKRRRRLFAKRIRYEV
RRANAVKRPRFKGRFIKEEDDEGELRPTQPASFSLLLPSSPASSPCVSLHGKRTR
MARGQRRRRRRRPEPRARASGKGKKARYLSLSDLMVKAEVGATPPRSGCEEAGVKPEEEDARGDGQQRQVEPFAPHHHHE
ASTLFEALPAPSLSDILGPSPSPSPDGAGSGASGLPGADEEDLPRRALRGRERWVYCSGDSSFSPASTPPATATATTSSP
SPPCSSSAASTGASARSLLLKLDYEEILAAWADRGPLYIGAGSDLQLDAAQVASGRAERVRRYKEKRRRRLFAKRIRYEV
RRANAVKRPRFKGRFIKEEDDEGELRPTQPASFSLLLPSSPASSPCVSLHGKRTR
MARGQRRRRRRRPEPRARASGKGKKARYLSLSDLMVKAEVGATPPRSGCEEAGVKPEEEDARGDGQQRQVEPFAPHHHHE
ASTLFEALPAPSLSDILGPSPSPSPDGAGSGASGLPGADEEDLPRRALRGRERWVYCSGDSSFSPASTPPATATATTSSP
SPPCSSSAASTGASARSLLLKLDYEEILAAWADRGPLYIGAGSDLQLDAAQVASGRAERVRRYKEKRRRRLFAKRIRYEV
RRANAVKRPRFKGRFIKEEDDEGELRPTQPASFSLLLPSSPASSPCVSLHGKRTR
Secondary Structure Color Code | |
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BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF06203 |
|
PF06203 |
|
Hover here to show all domains |
AAAGTCTCTCCCTCCCCCTCGTGTA...
AAAGTCTCTCCCTCCCCCTCGTGTACGACGCAAAGGGGAGCACCGCAATCCGGCCCGCCAACGGCGTGCCTCCACCTCGGCCAGCCGCCGCCACGTCAGCGCGTGATCGGGGAAAAGCGGCCTGGCCACCATGCTTCTCGCGGTCTCGCCGCGGTCGCGGGCTTTCCCTCGCTGCTCCAAACAGTCGTCCAGGACAGCCCCGGATCCCGTGACAAAAGAAGCGTCGCCAATTCGCCATGGCCCGTGGCCAGCGGCGGCGGAGGCGGCGGAGGCCGGAGCCGCGGGCGAGGGCCAGTGGCAAGGGGAAGAAGGCCAGGTACCTGAGCCTCAGCGACCTCATGGTTAAGGCGGAGGTGGGAGCGACGCCGCCGCGGTCCGGGTGCGAGGAGGCGGGCGTGAAGCCTGAGGAGGAGGACGCCCGCGGCGACGGGCAGCAGCGGCAGGTGGAGCCGTTCGCGCCGCACCACCACCACGAGGCGTCCACCCTGTTCGAGGCCCTGCCGGCGCCTTCGCTCTCCGACATCCTCGGCCCGTCGCCGTCGCCGTCGCCCGACGGGGCCGGCTCCGGGGCCTCGGGGCTCCCGGGCGCCGACGAGGAGGACCTGCCGCGCCGCGCGCTGCGGGGCAGGGAGCGCTGGGTGTACTGCAGCGGCGACTCCTCGTTCTCGCCGGCGTCCACGCCGCCCGCCACCGCCACGGCCACCACGTCGTCGCCGTCGCCGCCGTGCTCGTCGTCCGCCGCGAGCACGGGCGCGTCGGCGCGCTCGCTGCTGCTCAAGCTGGATTACGAGGAGATCCTCGCGGCCTGGGCGGACCGGGGGCCGCTCTACATCGGCGCCGGCAGCGACCTGCAACTCGACGCAGCGCAGGTGGCTTCGGGGAGGGCGGAGAGGGTGAGGCGGTACAAGGAGAAGCGGCGGAGGCGGCTCTTCGCGAAGCGGATCCGCTACGAGGTTCGCCGGGCCAATGCCGTCAAGCGGCCGCGGTTCAAGGGCCGTTTCATCAAGGAGGAGGACGACGAAGGCGAGCTCCGGCCTACACAGCCTGCCTCCTTCAGTTTGCTTCTTCCATCATCGCCAGCCTCGTCCCCGTGTGTATCACTGCATGGCAAAAGAACTCGATAGCTAGCTGCGATACGTACATGTATCTTGTAAAACAGTAACCAGGAAAAAAAAAGAAATTGCTACAGCCATGGTCTGGGATTTCGAGGTCCATTGATGGGAGGCATCTTTGATGACTCATTGCTTTCTCCGTAACAAGGGCTCATTGTTACTCGTTGTTGGTCTCTTCCCTTTGCGTTGAGCTTGTGTCCTATACTCCTATCACAGTCAATAGAACGTCG
MARGQRRRRRRRPEPRARASGKGKKARYLSLSDLMVKAEVGATPPRSGCEEAGVKPEEEDARGDGQQRQVEPFAPHHHHE
ASTLFEALPAPSLSDILGPSPSPSPDGAGSGASGLPGADEEDLPRRALRGRERWVYCSGDSSFSPASTPPATATATTSSP
SPPCSSSAASTGASARSLLLKLDYEEILAAWADRGPLYIGAGSDLQLDAAQVASGRAERVRRYKEKRRRRLFAKRIRYEV
RRANAVKRPRFKVVTNSSPHVLSWDALQGRF
CGACGCAAAGGGGAGCACCGCAATC...
CGACGCAAAGGGGAGCACCGCAATCCGGCCCGCCAACGGCGTGCCTCCACCTCGGCCAGCCGCCGCCACGTCAGCGCGTGATCGGGGAAAAGCGGCCTGGCCACCATGCTTCTCGCGGTCTCGCCGCGGTCGCGGGCTTTCCCTCGCTGCTCCAAACAGTCGTCCAGGACAGCCCCGGATCCCGTGACAAAAGAAGCGTCGCCAATTCGCCATGGCCCGTGGCCAGCGGCGGCGGAGGCGGCGGAGGCCGGAGCCGCGGGCGAGGGCCAGTGGCAAGGGGAAGAAGGCCAGGTACCTGAGCCTCAGCGACCTCATGGTTAAGGCGGAGGTGGGAGCGACGCCGCCGCGGTCCGGGTGCGAGGAGGCGGGCGTGAAGCCTGAGGAGGAGGACGCCCGCGGCGACGGGCAGCAGCGGCAGGTGGAGCCGTTCGCGCCGCACCACCACCACGAGGCGTCCACCCTGTTCGAGGCCCTGCCGGCGCCTTCGCTCTCCGACATCCTCGGCCCGTCGCCGTCGCCGTCGCCCGACGGGGCCGGCTCCGGGGCCTCGGGGCTCCCGGGCGCCGACGAGGAGGACCTGCCGCGCCGCGCGCTGCGGGGCAGGGAGCGCTGGGTGTACTGCAGCGGCGACTCCTCGTTCTCGCCGGCGTCCACGCCGCCCGCCACCGCCACGGCCACCACGTCGTCGCCGTCGCCGCCGTGCTCGTCGTCCGCCGCGAGCACGGGCGCGTCGGCGCGCTCGCTGCTGCTCAAGCTGGATTACGAGGAGATCCTCGCGGCCTGGGCGGACCGGGGGCCGCTCTACATCGGCGCCGGCAGCGACCTGCAACTCGACGCAGCGCAGGTGGCTTCGGGGAGGGCGGAGAGGGTGAGGCGGTACAAGGAGAAGCGGCGGAGGCGGCTCTTCGCGAAGCGGATCCGCTACGAGGTTCGCCGGGCCAATGCCGTCAAGCGGCCGCGGTTCAAGGTGGTGACAAATTCTTCTCCTCATGTCTTAAGTTGGGACGCACTGCAGGGCCGTTTCTGATCCTGGTGGATATGATGCACTGCAGGGCCGTTTCATCAAGGAGGAGGACGACGAAGGCGAGCTCCGGCCTACACAGCCTGCCTCCTTCAGTTTGCTTCTTCCATCATCGCCAGCCTCGTCCCCGTGTGTATCACTGCATGGCAAAAGAACTCGATAGCTAGCTGCGATACGTACATGTATCTTGTAAAACAGTAACCAGGAAAAAAAAAGAAATTGCTACAGCCATGGTCTGGGATTTCGAGGTCCATTGATGGGAGGCATCTTTGATGACTCATTGCTTTCTCCGTAACAAGGGCTCATTGTTACTCGTTGTTGGTCTCTTCCCTTTGCGTTGAGCTTGTGTCCTATACTCCTATCACA
MARGQRRRRRRRPEPRARASGKGKKARYLSLSDLMVKAEVGATPPRSGCEEAGVKPEEEDARGDGQQRQVEPFAPHHHHE
ASTLFEALPAPSLSDILGPSPSPSPDGAGSGASGLPGADEEDLPRRALRGRERWVYCSGDSSFSPASTPPATATATTSSP
SPPCSSSAASTGASARSLLLKLDYEEILAAWADRGPLYIGAGSDLQLDAAQVASGRAERVRRYKEKRRRRLFAKRIRYEV
RRANAVKRPRFKVVTNSSPHVLSWDALQGRF
AAAGTCTCTCCCTCCCCCTCGTGTA...
AAAGTCTCTCCCTCCCCCTCGTGTACGACGCAAAGGGGAGCACCGCAATCCGGCCCGCCAACGGCGTGCCTCCACCTCGGCCAGCCGCCGCCACGTCAGCGCGTGATCGGGGAAAAGCGGCCTGGCCACCATGCTTCTCGCGGTCTCGCCGCGGTCGCGGGCTTTCCCTCGCTGCTCCAAACAGTCGTCCAGGACAGCCCCGGATCCCGTGACAAAAGAAGCGTCGCCAATTCGCCATGGCCCGTGGCCAGCGGCGGCGGAGGCGGCGGAGGCCGGAGCCGCGGGCGAGGGCCAGTGGCAAGGGGAAGAAGGCCAGGTACCTGAGCCTCAGCGACCTCATGGTTAAGGCGGAGGTGGGAGCGACGCCGCCGCGGTCCGGGTGCGAGGAGGCGGGCGTGAAGCCTGAGGAGGAGGACGCCCGCGGCGACGGGCAGCAGCGGCAGGTGGAGCCGTTCGCGCCGCACCACCACCACGAGGCGTCCACCCTGTTCGAGGCCCTGCCGGCGCCTTCGCTCTCCGACATCCTCGGCCCGTCGCCGTCGCCGTCGCCCGACGGGGCCGGCTCCGGGGCCTCGGGGCTCCCGGGCGCCGACGAGGAGGACCTGCCGCGCCGCGCGCTGCGGGGCAGGGAGCGCTGGGTGTACTGCAGCGGCGACTCCTCGTTCTCGCCGGCGTCCACGCCGCCCGCCACCGCCACGGCCACCACGTCGTCGCCGTCGCCGCCGTGCTCGTCGTCCGCCGCGAGCACGGGCGCGTCGGCGCGCTCGCTGCTGCTCAAGCTGGATTACGAGGAGATCCTCGCGGCCTGGGCGGACCGGGGGCCGCTCTACATCGGCGCCGGCAGCGACCTGCAACTCGACGCAGCGCAGGTGGCTTCGGGGAGGGCGGAGAGGGTGAGGCGGTACAAGGAGAAGCGGCGGAGGCGGCTCTTCGCGAAGCGGATCCGCTACGAGGTTCGCCGGGCCAATGCCGTCAAGCGGCCGCGGTTCAAGGTGGTGACAAATTCTTCTCCTCATGTCTTAAGTTGGGACGCACTGCAGGGCCGTTTCTGATCCTG
RRRQGLEQGGRLVVVVRRERLHLPLLPVAAGVLLLRLHARLLAPGPRRRRSHLRLNHEVAEAQVPGLLPLATGPRPRLRP
PPPPPPLATGHGELATLLLSRDPGLSWTTVWSSEGKPA
GAAGGCGCCGGCAGGGCCTCGAACA...
GAAGGCGCCGGCAGGGCCTCGAACAGGGTGGACGCCTCGTGGTGGTGGTGCGGCGCGAACGGCTCCACCTGCCGCTGCTGCCCGTCGCCGCGGGCGTCCTCCTCCTCAGGCTTCACGCCCGCCTCCTCGCACCCGGACCGCGGCGGCGTCGCTCCCACCTCCGCCTTAACCATGAGGTCGCTGAGGCTCAGGTACCTGGCCTTCTTCCCCTTGCCACTGGCCCTCGCCCGCGGCTCCGGCCTCCGCCGCCTCCGCCGCCGCTGGCCACGGGCCATGGCGAATTGGCGACGCTTCTTTTGTCACGGGATCCGGGGCTGTCCTGGACGACTGTTTGGAGCAGCGAGGGAAAGCCCGCG
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